FOR
IMMEDIATE RELEASE
Contact Information:
Eidogen Deposits 3D Structure of Human SARS Coronavirus
Protease
Into Publicly Available Protein Data Bank
Pasadena, CA (May 14, 2003) - Eidogen, Inc.,
a biotechnology company committed to developing
the finest computational drug discovery platforms,
has deposited a high-resolution 3-dimensional
structural model of the protease enzyme from
the Coronavirus that causes Severe Acute Respiratory
Syndrome (SARS) into the publicly available
Protein Data Bank (PDB). “We would like
to make this structure freely available to
drug designers working to meet the urgent medical
needs of those patients who are suffering from
SARS infection,” said Dr. Derek Debe,
Eidogen’s CEO. The structure is expected
to facilitate the development of protease inhibitors
to combat the spread of SARS.
Researchers
at Eidogen built the model structure for SARS
protease based on its homology to the
known Coronavirus protease structure from Transmissible
Gastroenteritis Virus (PDB ID: 1LVO). After building
the structure, Eidogen researchers used their
newly released Target Informatics Platform™ (TIP™)
to compare the SARS protease with the structure
of a protease from human Rhinovirus, the virus
responsible for the common cold (PDB ID: 1CQQ).
Eidogen’s comparative analysis of the
two protease structures revealed significant
similarities in the substrate binding sites. “Because
of similarities
spanning the P3 to P1’ substrate binding
subpockets, we expect that a number of the compounds
previously developed to inhibit the rhinovirus
protease may show activity against the SARS protease,” said
Dr. Chen-Chen Kan, Eidogen’s Vice President
of Pre-Clinical Drug Discovery. Eidogen’s
analysis also revealed that unique structural
features of the SARS protease in the P4 substrate
binding subpocket could be exploited for the
development of novel drugs with improved potency
against SARS.
The SARS Coronavirus protease structure is available
for download at the PDB site (www.rcsb.org),
(PDB ID: 1PA5).
About Eidogen, Inc.
Eidogen is a Pasadena, California-based company
committed to developing the finest computational
drug discovery platforms ever developed. Eidogen's
Target Informatics
Platform (TIP) is the world's
first structural and comparative proteomics
enterprise software solution. TIP allows drug
discovery researchers and organizations to
attack their druggability, selectivity, toxicity,
and reduced market exclusivity problems by
supporting new and truly collaborative research
in target prioritization, lead discovery, and
lead optimization. Please visit www.eidogen.com to learn more.
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