OVERVIEWTARGET-BASED SOLUTIONSLIGAND-BASED SOLUTIONSSERVICES
KINASE KNOWLEDGEBASEARK™ChIP™
 

The core of ARK™ is an automatic feedback loop that supports medicinal chemists with information for prioritization and optimization of libraries and lead compounds. While exploring ideas in ARK™, virtual molecules are entered into the database and molecular descriptors (physicochemical properties, ADME, toxicity) are calculated and the predicted potency and selectivity for the selected target are immediately sent to the chemist. Eidogen-Sertanty uses an enhanced, proprietary 3-point-pharmacophore fingerprint technology and high quality empirical SAR data to develop target specific eScreen results against a single target or an entire gene family.

Avoid failure of compounds in the clinic by designing a desirable selectivity profile. Very few compounds are tested for selectivity in the early lead discovery stage because biological screening of a large number of compounds against an entire panel of targets is not financially feasible. As a result, the "selectivity matrix" of randomly picked example kinase inhibitors below (Figure 1) is grey.



Eidogen-Sertanty offers a cost effective in silico method to check literally millions of virtual molecules for potency and selectivity. "Hot Spots" in the selectivity matrix alert researchers early on to select and monitor anti-targets and therefore reduce failure rates in the clinic (Figure 2.)



The eScreen process enables scaffold jumping as well as lead optimization. Eidogen-Sertanty works closely with its clients to assure that training sets and models are optimized for the individual research project.

The following eScreen models are currently available for the kinase family:

AGC Kinase Models
  • PKA
  • PKC
  • PRKCA
  • PRKCB1
  • PRKCD
  • PRKCA_DAG
  • PRKCB1_DAG
  • PRKCE_DAG
  • PRKCG_DAG
  • PRKCH_DAG
  • PDK
CMGC Kinase Models
  • CDC2
  • CDK1_B
  • CDK2
  • CDK2_A
  • CDK2_E
  • CDK4_D1
  • CDK4_D2
  • CDK5
  • CDK5_P25
  • CDK5_P35
  • MAPK14
  • GSK3A
  • GSK3B
Receptor Tyrosine Kinase Models
  • CSK
  • SRC
  • FYN
  • LCK
  • ABL
  • SYK
  • ZAP_70_SH2
  • GRB2_SH2
  • EGFR
  • ERBB2
  • FGFR
  • EGFR_SUBSTRATE
  • PDGFR
  • PDGFRB
  • FLT1
  • KDR
  • TEK
TKL and STE Kinase Models
  • RAF1
  • MAP2K
Others
  • ADK
  • PPK
  • PIK4CA
Data Access

The training sets can be purchased in SD or TDT file format.